BIOS25328

Cancer Genetics and Genomics BIOS-25328

This page contains material for the BIOS25328 Cancer Genetics and Genomics course, starting from 2024. 2023 and prior material is here

 

homework 5

bios25328
homework
© HakyImLab and Listed Authors - CC BY 4.0 License
Apr 19, 2024
Haky Im

 

lab 4

In this lab we are going to use the PRSice software to take height GWAS results and predict height of the Personal Genome Project individuals using their genotype data.
Apr 12, 2024
Liz Gibbons

 

homework 4

bios25328
homework
© HakyImLab and Listed Authors - CC BY 4.0 License
Apr 12, 2024
Haky Im

lecture 8

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lecture
Lecture 8 notes link
Apr 10, 2024
Haky Im

 

lecture 7

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lecture
Lecture 7 notes link
Apr 8, 2024
Haky Im

 

lab 3

bios25328
lab

In this lab, you will run all the steps of a GWAS analysis using the Marees et al tutorial.
Apr 5, 2024

 

homework 3

bios25328
homework
Calculate PCs using plink (10pt)
Apr 5, 2024
Haky Im

 

lecture 6

bios25328
lecture
Lecture 6 notes link
Apr 3, 2024
Haky Im

 

lecture 5

bios25328
lecture
Lecture 5 slides link
Apr 1, 2024
Haky Im

 

lab 2

bios25328
lab
get started with simulations for homework 2
Mar 29, 2024

 

lecture 3

bios25328
lecture
Lecture 3 notes link
Mar 25, 2024
Haky Im

 

homework 2

bios25328
homework
Hint: use the code from the lecture slides or here
Mar 25, 2024
Haky Im

 

lecture 2

Dissection of Genetics & Prediction of Cancer Risk: Methods & Tools
Mar 20, 2024
Haky Im

 

lab 1 - command line and R

bios25328
lab
We will learn to use the command line by doing. Follow the instructions below.
Mar 18, 2024
Haky Im

 

homework 1

bios25328
homework
Homeworks problems for week 1
Mar 18, 2024
Haky Im
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© HakyImLab and Listed Authors - CC BY 4.0 License